Adam Herman
Surgery Bioinformatics Analyst
UMN Email:
aherman@umn.edu
Office:
512 Walter Library
Phone:
(612) 624-0533
Expertise:
-
Single-cell
- RNA (10X), CyTOF
- Spatial-omics
- 10X Visium, MIBI
- Population/Evolutionary Genomics
- Variant calling, genetic diversity, admixture, population demography, phylogenetics
- Next-generation sequence data across technologies and datatypes
- DNA: whole genome, SBG/GBS, Amplicon
- RNA (cDNA): expression and variant calling
- Epigenetic: methylation array (mouse and human), ATAC-seq
- High performance computing and programming
- Slurm, PBS
- BASH, R, Python
- Collaboration
- Google Drive, Box, Github, Overleaf
- DRUM, Dryad, NCBI
Education:
- Postdoc, Plant and Microbial Biology, University of Minnesota
- PhD, Biology, McGill University
- BS, Botany, Northern Michigan University