Qiime

Software Summary

Mesabi

Default Module:

1.9.1_centos7

Other Modules Available:

1.9.1_centos7, 1.7.0, 1.8.0, 1.9.1, 1.9.1.conda

Last Updated On:

Tuesday, August 29, 2023

Mesabi K40

Default Module:

Other Modules Available:

Last Updated On:

Mangi

Default Module:

1.9.1_centos7

Other Modules Available:

1.9.1_centos7, 1.7.0, 1.8.0, 1.9.1, 1.9.1.conda

Last Updated On:

Tuesday, August 29, 2023

Mangi v100

Default Module:

Other Modules Available:

Last Updated On:

NICE

Default Module:

Other Versions Available:

Last Updated On:

Tuesday, August 29, 2023

Support Level:

Secondary Support

Software Access Level:

Open Access

Home Page:

Link

Software Categories:

Genetics

Data Visualization

Software Description

QIIME (canonically pronounced ‘Chime’) is a pipeline for performing microbial community analysis that integrates many third party tools which have become standard in the field.

Software Documentation

Software Documentation Tabs

General Linux

To run qiime interatively on a Linux system, use the following command to load the module and then enter the name of the qiime program that you want to run

module load qiime

For more information on Qiime specific tutorials, please refer to:

http://qiime.org/tutorials/index.html