ea-utils

Software Summary

Mesabi

Default Module:

1.1.2-318

Other Modules Available:

1.1.2-318

Last Updated On:

Tuesday, August 29, 2023

Mesabi K40

Default Module:

Other Modules Available:

Last Updated On:

Mangi

Default Module:

1.1.2-318

Other Modules Available:

1.1.2-318

Last Updated On:

Tuesday, August 29, 2023

Mangi v100

Default Module:

Other Modules Available:

Last Updated On:

NICE

Default Module:

Other Versions Available:

Last Updated On:

Tuesday, August 29, 2023

Support Level:

Secondary Support

Software Access Level:

Open Access

Home Page:

Link

Software Categories:

Genetics

Software Description

ea-utils provides command-line tools for processing biological sequencing data using methods such as barcode demultiplexing, adapter trimming, etc. It was primarily written to support an Illumina based pipeline - but should work with any FASTQs.

Software Documentation

Software Documentation Tabs

General Linux

To run this software interactively in a Linux environment run the commands:

module load ea-utils
fastq-clipper
     
     or

fastq-join

or

fastq-mcf

or

fastq-multx