CD-HIT

Software Summary

Mesabi

Default Module: 

4.6.1

Other Modules Available: 

4.3, 4.6.1, 4.8.1

Last Updated On: 

Tuesday, August 29, 2023

Mesabi K40

Default Module: 
Other Modules Available: 
Last Updated On: 

Mangi

Default Module: 
4.6.1
Other Modules Available: 

4.3, 4.6.1, 4.8.1

Last Updated On: 

Tuesday, August 29, 2023

Mangi v100

Default Module: 
Other Modules Available: 
Last Updated On: 

NICE

Default Module: 
Other Versions Available: 
Last Updated On: 
Last Updated On: 

Tuesday, August 29, 2023

Support Level: 
Secondary Support
Software Access Level: 
Open Access
Home Page: 
Link
Software Categories: 
Genetics
Proteomics
Software Description

CD-HIT is a program for clustering large protein database at high sequence identity threshold. The program removes redundant sequences and generate a database of only the representatives. It can be applied in protein family classification, domain analysis, organizing large protein databases, improving performance of database search, and much more.