Minnesota Supercomputing Institute
1.9
Tuesday, August 29, 2023
BRAKER1 is software for unsupervised RNA-Seq-based genome annotation with GeneMark-ET and AUGUSTUS.
To run this software interactively in a Linux Environment run the commands:
module load braker1 braker.pl [OPTIONS] --genome=genome.fa --species=speciesname --bam=accepted_hits.bam
For a list of all options use the command:
braker1.pl