ADAM

Software Summary

Mesabi

Default Module: 

06042018

Other Modules Available: 

06042018

Last Updated On: 

Tuesday, August 29, 2023

Mesabi K40

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Other Modules Available: 
Last Updated On: 

Mangi

Default Module: 
06042018
Other Modules Available: 

06042018

Last Updated On: 

Tuesday, August 29, 2023

Mangi v100

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Other Modules Available: 
Last Updated On: 

NICE

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Last Updated On: 
Last Updated On: 

Tuesday, August 29, 2023

Support Level: 
Secondary Support
Software Access Level: 
Open Access
Home Page: 
Link
Software Categories: 
Biostatistics
Genetics
Software Description

ADAM is a library and command line tool that enables the use of Apache Spark to parallelize genomic data analysis across cluster/cloud computing environments. ADAM uses a set of schemas to describe genomic sequences, reads, variants/genotypes, and features, and can be used with data in legacy genomic file formats such as SAM/BAM/CRAM, BED/GFF3/GTF, and VCF, as well as data stored in the columnar Apache Parquet format.

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