ABySS

Software Summary

Mesabi

Default Module: 

2.1.5

Other Modules Available: 

2.1.5, 1.3.3, 1.3.4, 1.3.6, 1.5.2, 1.9.0, 2.0.2

Last Updated On: 

Tuesday, August 29, 2023

Mesabi K40

Default Module: 
Other Modules Available: 
Last Updated On: 

Mangi

Default Module: 
2.1.5
Other Modules Available: 

2.1.5, 1.3.3, 1.3.4, 1.3.6, 1.5.2, 1.9.0, 2.0.2

Last Updated On: 

Tuesday, August 29, 2023

Mangi v100

Default Module: 
Other Modules Available: 
Last Updated On: 

NICE

Default Module: 
Other Versions Available: 
Last Updated On: 
Last Updated On: 

Tuesday, August 29, 2023

Support Level: 
Secondary Support
Software Access Level: 
Open Access
Home Page: 
Link
Software Categories: 
Genetics
Software Description

ABySS is a de novo, parallel, paired-end genomic sequence assembler that is designed for short reads. The single-processor version is useful for assembling genomes up to 100 Mbases in size. The parallel version is implemented using MPI and is capable of assembling larger genomes. To assemble transcriptome data, consider the related program trans-abyss.

Homepage: http://www.bcgsc.ca/platform/bioinfo/software/abyss

Software Documentation

Software Documentation Tabs